Filing Deadline: Mon 8/18/2025
UC San Diego values equity, diversity, and inclusion. If you are interested in being part of our team, possess the needed licensure and certifications, and feel that you have most of the qualifications and/or transferable skills for a job opening, we strongly encourage you to apply.UCSD Layoff from Career Appointment: Apply by 07/14/2025 for consideration with preference for rehire. All layoff applicants should contact their Employment Advisor.
Special Selection Applicants: Apply by 07/24/2025. Eligible Special Selection clients should contact their Disability Counselor for assistance.
The Research Software Developer position is in the software development team at the Ideker lab (https://idekerlab.ucsd.edu/) in the UCSD School of Medicine, a lab known for its friendly, inclusive, and collaborative environment. The software development team has a strong track record of mentoring and skills development. The lab performs bioinformatics research coupled with wet-lab investigations. We work in network biology, data-driven hierarchical modeling, and machine learning applied to biomedicine. The Ideker lab also supports multiple open-source software projects, some with 10K+ users.
The Research Software Developer will work under the supervision of the senior members of the software development team on a wide range of projects.
The incumbent will assist in creating and maintaining software and websites supporting researchers in the Ideker laboratory. In this role, they will work closely with graduate students, postdocs, and senior researchers. They will be well integrated into the lab's research and be expected to understand the methods and algorithms in use by or being developed by the researchers. They will participate in the productization cutting-edge research, making techniques broadly available via toolkits, web applications, and web services. In some cases, they will contribute to the writing of grant proposals and academic papers.
The incumbent will also participate in the development, production, and support of the open-source software projects Cytoscape and NDEx. (www.cytoscape.org, www.ndexbio.org). In this work, they will use multiple technologies (both front-end, back-end, and database). They must successfully acquire skills in new programming languages and environments, packages, and databases as the needs of the lab develop.
Uses professional bioinformatics concepts. Applies computational procedures to resolve a variety of analysis and research issues. Works on assignments of moderate scope where analysis of data requires a review of a variety of factors. Assists in additional analyses as needed to achieve research objectives.
Six years of related experience, education/training, OR an Bachelor’s degree in related area plus two years of related experience/training.
Working knowledge of bioinformatics methods and data structures.
Working knowledge of applications programming and web development. Experience with web development, building user interfaces, working with REST services, and basic Linux skills preferred.
Working knowledge of databases.
Working project management skills.
Working knowledge of modern biology and applicable field of research.
Interpersonal skills in order to work with both technical and non-technical personnel at various levels in the organization.
Ability to communicate technical information in a clear and concise manner. Ability to communicate effectively with researchers with a wide range of technical expertise, especially during requirements gathering, training,question answering, and presentations.
Self motivated, able to learn quickly, meet deadlines and demonstrate problem solving skills. Ability to manage their time well and work effectively with the team to meet deadlines.
Working knowledge of application and data security concepts.
Fluency in at least two of Python, Java, or JavaScript is essential. Familiarity with GitHub, open source software, and the software release process.
Working knowledge of biology or bioinformatics.
Basic knowledge of network and systems biology tools and techniques such as GO and pathway enrichment analysis or queries to find subsets of biological networks, and tools related to the Cytoscape application.
Experience with python, javascript, java, and modern web-development frameworks such as REACT.
Experience using data science tools such as Pandas, Numpy, or SciKit. Knowledge of statistics and the relevant mathematics.
Pay Transparency Act
Annual Full Pay Range: $79,200 - $143,400 (will be prorated if the appointment percentage is less than 100%)
Hourly Equivalent: $37.93 - $68.68
Factors in determining the appropriate compensation for a role include experience, skills, knowledge, abilities, education, licensure and certifications, and other business and organizational needs. The Hiring Pay Scale referenced in the job posting is the budgeted salary or hourly range that the University reasonably expects to pay for this position. The Annual Full Pay Range may be broader than what the University anticipates to pay for this position, based on internal equity, budget, and collective bargaining agreements (when applicable).
If employed by the University of California, you will be required to comply with our Policy on Vaccination Programs, which may be amended or revised from time to time. Federal, state, or local public health directives may impose additional requirements.If applicable, life-support certifications (BLS, NRP, ACLS, etc.) must include hands-on practice and in-person skills assessment; online-only certification is not acceptable.UC San Diego Health Sciences is comprised of our School of Medicine, Skaggs School of Pharmacy and Pharmaceutical Sciences, The Herbert Wertheim School of Public Health and Human Longevity Science, and our Student Health and Well-Being Department. We have long been at the forefront of translational - or "bench-to-bedside" - research, transforming patient care through discovery and innovation leading to new drugs and technologies. Translational research is carried out every day in the hundreds of clinical trials of promising new therapies offered through UC San Diego Health, and in the drive of our researchers and clinician-scientists who are committed to having a significant impact on patient care. We invite you to join our team!
Applications/Resumes are accepted for current job openings only. For full consideration on any job, applications must be received prior to the initial closing date. If a job has an extended deadline, applications/resumes will be considered during the extension period; however, a job may be filled before the extended date is reached.
To foster the best possible working and learning environment, UC San Diego strives to cultivate a rich and diverse environment, inclusive and supportive of all students, faculty, staff and visitors. For more information, please visit UC San Diego Principles of Community.
The University of California is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, protected veteran status, or other protected status under state or federal law.
For the University of California’s Anti-Discrimination Policy, please visit: https://policy.ucop.edu/doc/1001004/Anti-Discrimination
UC San Diego is a smoke and tobacco free environment. Please visit smokefree.ucsd.edu for more information.
UC San Diego Health maintains a marijuana and drug free environment. Employees may be subject to drug screening.
...Job Description Job description We are seeking a Motion Graphics Designer/Video Editor to join our team in Irvine, CA. This role... ...is an in-office position within a professional workplace, and remote work is not an option. A portfolio is required for consideration...
...Store Discount Employee Assistance Program Flexible Schedule Earn up to $1.00 more per hour after becoming a certified Pharmacy Technician Individuals applying for this position should be willing to: Make lasting connections with our customers Stock...
...Anders Group is seeking a travel nurse RN Outpatient Clinic for a travel nursing job in Alpharetta, Georgia. Job Description & Requirements ~ Specialty: Clinic ~ Discipline: RN ~ Start Date: 11/03/2025~ Duration: 13 weeks ~40 hours per week ~ Shift: 8...
...for more information about our data handling practices and your data rights. Responsibilities: MV Transportation is seeking a Dispatcher who work s to direct the day-to-day route operations and report to the Dispatch Supervisors. This work is done in compliance...
...Description Job Description Job description Telephonic Interpreters Wanted (Work From Home) Do you interpret professionally in... ...service 24/7 and you can provide your service any time using our online portal or your phone to log on and off. -You must meet all...