Senior Bioinformatics Scientist Job at Fapon, Pleasanton, CA

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  • Fapon
  • Pleasanton, CA

Job Description

Company Description

PromptBio, established in 2023 in Pleasanton, California, is a biotechnology company dedicated to developing AI-driven workflows that automate the discovery of novel biomarkers from multi-omics data, translating them into clinical diagnostic applications.

We seek a motivated Senior Bioinformatics Scientist to join our interdisciplinary team, focusing on integrating AI solutions within the life sciences domain. The role will have significant customer facing responsibilities.

Key Responsibilities
  • Work closely with the Business Development team and serve as the primary scientific point of contact for enterprise customers, building deep technical relationships and helping customers derive biological insights.
  • Design and implement custom multi-omics analysis workflows (genomics, transcriptomics, proteomics, metabolomics, epigenomics) tailored to customer use cases
  • Evaluate and incorporate new bioinformatics tools, algorithms, and computational methods to stay at the forefront of the field.
  • Author and contribute to scientific publications, presentations, and IP filings.

Qualifications
  • Minimum of 3 years of industry experience in processing and analyzing mutli-omics datasets (e.g., genomics, transcriptomics, proteomics, metabolomics, epigenomics) and deriving meaningful insights
  • Hands-on experience with applying advanced statistical methods and machine learning techniques to analyze omics data and identify novel biomarkers, therapeutic targets, and molecular mechanisms.
  • Excellent publication record and communication skills with ability to explain concepts to diverse audiences.
  • Fluency in programming languages like Python, R, and bioinformatics workflows (e.g., using Nextflow, Snakemake, or similar).
  • Familiarity with software engineering best practices, including testing, code reviews, version control (e.g., Git), and containerization.
  • Experience with cloud computing environments and AI technologies is a significant plus.
  • PhD in Bioinformatics, Computational Biology, Genomics, or related field


Desired Attributes

  • Entrepreneurial mindset with comfort in ambiguous, fast-paced environments.
  • Proactive, results-oriented, and driven with a "get things done" mindset.
  • Strong problem-solving skills and adaptability to evolving project requirements.
  • Intellectual curiosity about emerging AI technologies and their biological applications.
  • Collaborative team player who thrives in dynamic environments.

Additional Information
  • Financial security through competitive compensation, incentives, and retirement plan
  • Healthcare and well-being programs including competitive medical, dental, and vision benefits
  • Generous paid time-off including vacation, sick time, holidays, and discretionary winter shutdown
  • 401(k) retirement savings with a generous company match
  • Other comprehensive voluntary benefits include but are not limited to pet insurance, life insurance, employee assistance program (EAP), discount programs, and many more
  • We continue to optimize our benefits & wellness programs as we grow our organization to make sure they meet our diverse workforce needs
  • Hybrid work opportunities.

Job Tags

Full time,

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